2006 Lincoln Navigator OBD2 Fuse and Fuse Box Diagram: Your Comprehensive Guide

Ensuring your 2006 Lincoln Navigator runs smoothly requires understanding its electrical system, and a key component of that is the fuse box. Fuses are safety devices that protect your vehicle’s electrical circuits from overloads. When a fuse blows, it interrupts the circuit, preventing damage to more expensive components. One crucial fuse to be aware of, especially for diagnostics, is related to the OBD2 port. This guide will provide you with a detailed breakdown of the 2006 Lincoln Navigator fuse box diagram, with a special focus on the OBD2 fuse location and its function.

Understanding Your 2006 Lincoln Navigator’s Fuse Box

Your 2006 Lincoln Navigator utilizes a centralized fuse box to manage and protect its various electrical systems. Knowing the location and function of each fuse is essential for troubleshooting electrical issues. This guide will help you identify the fuse responsible for the OBD2 port and other vital systems in your vehicle.

The On-Board Diagnostics II (OBD2) port is a critical interface in your Lincoln Navigator. It allows mechanics and vehicle owners to connect diagnostic tools to read trouble codes, monitor vehicle performance, and ensure everything is functioning correctly. If you’re experiencing issues connecting your OBD2 scanner, or if your check engine light is on, checking the OBD2 fuse should be one of your first steps.

2006 Lincoln Navigator Fuse Box Diagram and Fuse List

Below is a detailed breakdown of the fuses in your 2006 Lincoln Navigator’s fuse box. This diagram is crucial for identifying the correct fuse for each system. Locate your fuse box, typically found under the dashboard on the driver’s side or within the engine compartment, and use this guide to understand each fuse’s purpose.

Fuse Number Fuse Type Amperage Description
1 MINI 7.5A Run/Accessory – Instrument cluster, Front wiper motor, Rear wiper motor
2 MINI 20A Brake On/Off (stoplamp) switch, Turn signal/Hazard flasher, Stoplamps, Center High-Mounted Stoplamp (CHMSL), Turn signal lamps
3 MINI 7.5A Power mirror switch, Memory module (logic power), Driver seat switch (memory)
4 MINI 15A Rear seat audio controls, Navigation module, DVD player
5 MINI 7.5A Brake On/Off (stoplamp) switch, Powertrain Control Module (PCM) (keep alive power), EATC control head, Body Security Module (BSM) (keep alive power), Speed control deactivation switch, SecuriLock LED, 3rd row seat relay coils, Power liftgate module, Clock, Brake Shift Interlock (BSI) solenoid
6 MINI 15A Headlamp switch (parklamps and switch backlighting feed), Parklamps, License lamps, Foglamp relay coil, Trailer tow electric brake controller (illumination), BSM (autolamp parklamps), Floor console gear selector lighting, Foglamp indicator
7 MINI 5A Radio (Start signal)
8 MINI 10A Rear window defroster switch, Heated outside mirrors, Rear window defroster indicator (climate control head)
9 MINI 15A Transmission control module
10 MINI 20A Trailer tow back-up lamps relay, Trailer tow 7-wire connector (back-up lamps), Trailer tow parklamps relay, Trailer tow 7and 4-wire connectors (parklamps)
11 MINI 10A A/C compressor clutch relay, A/C compressor clutch solenoid, 4×4 Integrated Wheel Ends (IWE) solenoid
12 MINI 15A Fuel pump relay, Fuel pump shut-off switch, Fuel pump driver module, Fuel pump motor
13 MINI 10A Rear window defroster relay coil, A/C refrigerant containment switch, A/C de-icing switch, A/C low pressure switch, DATC control head, DATC solenoids, DATC blower controller, Trailer tow battery charge relay coil
14 MINI 10A Daytime Running Lamps (DRL) ignition relay coil, Trailer tow back-up lamps relay coil, Electrochromatic mirror, Back-up lamps relay, Back-up lamps
15 MINI 5A AdvanceTrac with RSC switch, Instrument cluster (Run/Start feed)
16 MINI 10A ABS/AdvanceTrac® with RSC module (Run/Start feed)
17 MINI 15A Foglamps
18 MINI 10A Auxiliary A/C temperature blend door actuator, Auxiliary A/C front auxiliary control, Park brake release relay coils, Turn signal flasher, Electrochromatic mirror, Auxiliary mode motor
19 MINI 10A Restraints Control Module (RCM)
20 MINI 30A BSM (door locks, liftgate glass release relay), Liftgate glass release motor, Left front window motor, Door/Liftgate lock motors
21 MINI 15A Instrument cluster (B+), Interior (courtesy) lamps, Park brake release relays, Park brake release motor, Puddle lamps (outside mirrors)
22 MINI 10A Moonroof switch illumination, Flip window switch, Flip window relays, Flip window motors, Electronic hidden antenna amplifier (navigation radio), Radio (delayed accessory feed), Left front window motor, Navigation module
23 MINI 10A RH low beam
24 MINI 15A Interior demand lamps (front map/dome lamps, glove compartment lamp, cargo lamp, roof rail lamps, vanity mirror lamps), Battery saver relay coil, Battery saver relay power, Heated Positive Crankcase Ventilation (PCV) valve, Heated PCV valve relay
25 MINI 10A LH low beam
26 MINI 20A Horn relay, Horns
27 MINI 5A Brake Shift Interlock solenoid, Reverse park aid system module, Air suspensión module (Run/Start), Compass module
28 MINI 5A PCM relay coil, SecuriLock transceiver, Heated PCV valve relay coil
29 MINI 30A Trailer tow electric brake controller, Trailer tow 7-wire connector (electric brake)
30 MINI 25A PCM (4×4 transfer case clutch), Air suspensión module (air spring solenoids and height sensors)
31 MINI 20A Radio (B+), Subwoofer, Navigation radio audio amplifier
32 MINI 15A Catalyst Monitor Sensors (CMS), 6-speed transmission (ignition sense), HEGO sensors, Canister vent solenoid, Vapor Management valve (VMV) solenoid, A/C compressor clutch relay coil, CMCV, VCT actuators
34 MINI 15A PCM, Mass Air Flow (MAF) sensor, Fuel injectors
35 MINI 20A High beam headlamps, Instrument cluster high beam indicator
36 MINI 10A Trailer tow right turn/stop lamps
37 MINI 20A Cargo area power point
38 MINI 25A Rear wiper motor, Washer pump (rear window wash)
39 MINI 20A Console power points
40 MINI 20A DRL relays, DRL foglamps, DRL headlamp relay coil, Headlamp switch (headlamps), Multifunction switch (flash-to-pass), BSM (autolamp headlamps relay), High beam relay coil, Fuse 25 (LH low beam), Fuse 23 (RH low beam)
41 MINI 20A Cigarette lighter, OBD II diagnostic connector
42 MINI 10A Trailer tow left turn/stop lamps
101 FMX/JCase 30A Starter motor relay, Starter motor solenoid
102 FMX/JCase 30A Ignition switch power
103 FMX/JCase 30A ABS/AdvanceTrac with RSC module (pump motor)
104 FMX/JCase 30A LH 3rd row seat relay, LH 3rd row seat switch, LH 3rd row seat motor
105 FMX/JCase 30A Power liftgate module, Power liftgate motors, Power running boards control
106 FMX/JCase 30A Trailer tow battery charge relay, Trailer tow 7-wire connector (battery charge)
107 FMX/JCase 30A Auxiliary A/C blower relay, Auxiliary A/C blower motor
108 FMX/JCase 30A Passenger seat motor switch, Passenger seat lumbar switch and motor
109 FMX/JCase 30A Driver seat lumbar switch and motor, Memory module, Power memory mirrors, Adjustable pedals switch and motor
110 FMX/JCase 30A Power running boards
111 FMX/JCase 50A Air suspensión compressor relay, Air suspensión compressor
112 FMX/JCase 30A ABS/AdvanceTrac with RSC module (valves)
113 FMX/JCase 30A Front wiper motor, Washer pump (windshield wash)
114 FMX/JCase 40A Rear window defroster relay, Rear window defroster grid, Heated mirrors (Fuse 8)
115 FMX/JCase 30A Transfer case shift motor, 4×4 relays
116 FMX/JCase 40A Front blower motor relay, Front blower motor
117 FMX/JCase 30A RH 3rd row seat relay, RH 3rd row seat switch, RH 3rd row seat motor
118 FMX/JCase 30A Driver and passenger climate control seat module
401 Circuit breaker MAXI 40A Power windows (circuit breaker), Main window switch, Window motors, Window switches, Moonroof module
R01 Relay Starter motor solenoid
R02 Relay Fuse 22, CB 401, Power windows, Moonroof, Flip windows, Radio, Navigation module, Navigation antenna amplifier
R03 Relay Fuse 35, Hi-beam headlamps, Hi-beam indicator
R04 Relay Fuse 8 (heated mirrors), Rear window defroster, Heated outside mirrors, Rear window defroster indicator (climate control head)
R05 Relay Trailer tow 7-wire connector (battery charge)
R06 Relay Front blower motor
R201 Relay Trailer tow 7 – and 4-wire connectors (park lamps)
R202 Relay Front foglamps
R203 Relay Fuse 32, Fuse 34, PCM solenoids and sensors
R301 Relay Trailer tow 7-wire connector (back-up lamps)
R302 Relay Heated PCV valve
R303 Relay Fuel pump shut-off switch, PCM (fuel pump monitor), Fuel pump, Fuel pump driver module
R304 Relay Roof rail lamps, Vanity mirror lamps, Map/Dome lamp, Glove box lamp, Cargo area lamp, Outside mirror puddle lamps, Instrument cluster (interior lamps)
R305 Relay Dual note horn

Note: Fuse box diagrams can slightly vary depending on the specific trim and options of your 2006 Lincoln Navigator. Always consult your vehicle’s owner’s manual for the most accurate fuse diagram for your specific vehicle.

Locating the OBD2 Fuse in Your 2006 Lincoln Navigator

As highlighted in the table, Fuse #41 (20A) is responsible for the OBD II diagnostic connector in your 2006 Lincoln Navigator. This fuse is located within the main fuse box. If you are experiencing issues with your OBD2 port, such as a scanner not powering on or failing to connect, checking this 20A fuse is crucial.

Steps to Check and Replace the OBD2 Fuse:

  1. Locate the Fuse Box: Refer to your owner’s manual to find the exact location of the fuse box in your 2006 Lincoln Navigator. It’s often under the driver’s side dashboard or in the engine bay.
  2. Identify Fuse #41: Once you’ve located the fuse box, use the diagram provided (or the one in your owner’s manual) to identify Fuse #41.
  3. Inspect the Fuse: Visually inspect the fuse. A blown fuse will typically have a broken wire inside the clear plastic casing.
  4. Test with a Multimeter (Optional): For a more accurate check, use a multimeter to test for continuity across the fuse terminals.
  5. Replace if Blown: If the fuse is blown, replace it with a new 20A MINI fuse. Important: Always use the correct amperage fuse. Using a fuse with a higher amperage can damage your vehicle’s electrical system.
  6. Test the OBD2 Port: After replacing the fuse, test your OBD2 port with a diagnostic scanner to see if it’s now working correctly.

Importance of Maintaining Your 2006 Lincoln Navigator Fuses

Regularly checking your fuses is a simple yet effective way to maintain your 2006 Lincoln Navigator’s electrical health. If you encounter any electrical issues, consulting your fuse box diagram and checking the relevant fuses can often be the quickest path to diagnosing and resolving the problem. Remember to always replace blown fuses with the correct type and amperage to ensure the continued safe and reliable operation of your vehicle.

By understanding your 2006 Lincoln Navigator fuse box diagram and specifically knowing the location of the OBD2 fuse, you are better equipped to handle basic electrical troubleshooting and maintain your vehicle effectively.

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